IPI report for IPI00007284

IpiRecord: IPI00007284

IPI00007284 - CLOCK, CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.
Uniprot Accession: Q9NYB7
Uniprot ID: Q9NYB7_HUMAN
Mapping: Chr 4, 55988827 - 56107754
Entrez Gene: 9575
Entrez MapView:
+All IPI Database Cross References UniProtKB/Swiss-Prot: O15516 UniProtKB/Swiss-Prot: CLOCK_HUMAN Vega: OTTHUMP00000128333 Vega: OTTHUMP00000128334 ENSEMBL_HAVANA: ENSP00000370723 ENSEMBL_HAVANA: ENSG00000134852 ENSEMBL_HAVANA: ENSP00000370726 ENSEMBL_HAVANA: ENSG00000134852 REFSEQ_REVIEWED: NP_004889 REFSEQ_REVIEWED: GI:4758010 UniProtKB/TrEMBL: A2I2N9 UniProtKB/TrEMBL: A2I2N9_HUMAN UniProtKB/TrEMBL: Q3ZCT4 UniProtKB/TrEMBL: Q3ZCT4_HUMAN UniProtKB/TrEMBL: Q8N757 UniProtKB/TrEMBL: Q8N757_HUMAN UniProtKB/TrEMBL: Q8TAB0 UniProtKB/TrEMBL: Q8TAB0_HUMAN UniProtKB/TrEMBL: Q9NYB7 UniProtKB/TrEMBL: Q9NYB7_HUMAN ENSEMBL: ENSP00000308741 ENSEMBL: ENSG00000134852 H-InvDB: HIT000062147 UniParc: UPI0000031303 HGNC: 2082 Entrez Gene: 9575 UniGene: Hs.436975 CCDS: CCDS3500.1 trome: HTR011013 RZPD: Hs.436975 CleanEx: HS_CLOCK InterPro: IPR001092 InterPro: IPR011598 InterPro: IPR001067 InterPro: IPR001610 InterPro: IPR000014 InterPro: IPR013655 InterPro: IPR013767 Pfam: PF00010 Pfam: PF00989 Pfam: PF08447 PRINTS: PR00785 SMART: SM00353 SMART: SM00086 SMART: SM00091 PROSITE: PS50888 PROSITE: PS50112 SUPERFAMILY: SSF47459 GENE3D: G3DSA:4.10.280.10

IPI00007284 - CLOCK, CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.

Uniprot Accession: Q9NYB7

Uniprot ID: Q9NYB7_HUMAN

Mapping: Chr 4, 55988827 - 56107754

Entrez Gene: 9575

Entrez MapView: Geneprod

+All IPI Database Cross References

IPI records in this ortholog cluster (Cluster: MGI_ORTHOLOGY_11816)
Rat: Clock, ISOFORM 2 OF CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.
Mouse: Clock, ISOFORM SHORT OF CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.
Mouse: Clock, ISOFORM LONG OF CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.
Mouse: Clock, MKIAA0334 PROTEIN (FRAGMENT).
Mouse: Clock, INSERT SEQUENCE.
Rat: Clock, ISOFORM 1 OF CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.
Rat: Clock, 97 KDA PROTEIN.
Human: CLOCK, CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.
Human: CLOCK, CLOCK VARIANT (FRAGMENT).

IPI records in this ortholog cluster (Cluster: MGI_ORTHOLOGY_11816)

Rat: Clock, ISOFORM 2 OF CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.

Mouse: Clock, ISOFORM SHORT OF CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.

Mouse: Clock, ISOFORM LONG OF CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.

Mouse: Clock, MKIAA0334 PROTEIN (FRAGMENT).

Mouse: Clock, INSERT SEQUENCE.

Rat: Clock, ISOFORM 1 OF CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.

Rat: Clock, 97 KDA PROTEIN.

Human: CLOCK, CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT.

Human: CLOCK, CLOCK VARIANT (FRAGMENT).

Annotations for CLOCK and orthologs

GO Annotation Table

Compiled GO Annotations (from IPI)

GO Term	Aspect	Human	Mouse	Rat
nucleus	C	IEA	IDA	ISS
transcription factor complex	C	IPI	IDA ISS
cytoplasm	C	IEA	IDA	ISS
transcription regulator activity	F		IEA
two-component sensor activity	F		IEA
DNA binding	F		IEA
transcription factor activity	F	TAS IEA	IDA ISS	ISS ISS ISS
protein binding	F	IEA	IPI ISS IPI	ISS ISS
signal transducer activity	F	IEA	IEA
transcription factor binding	F		ISS
entrainment of circadian clock	P			IEP
circadian rhythm	P	TAS	IDA IMP IMP	NAS ISS ISS
photoperiodism	P	TAS		ISS
regulation of transcription	P		IEA
rhythmic process	P		IEA
regulation of transcription, DNA-dependent	P	IEA	IDA	ISS ISS
regulation of transcription from RNA polymerase II promoter	P			ISS
two-component signal transduction system (phosphorelay)	P		IEA
signal transduction	P	TAS IEA	IEA	ISS
transcription	P		IEA
positive regulation of transcription from RNA polymerase II promoter	P	IGI	IGI ISS

Cellular Component

GO Graph Color Key:

Rat

Mouse

Human

Rat & Mouse

Mouse & Human

Rat & Human

Rat, Mouse & Human

SVG image

Biological Process

GO Graph Color Key:

Rat

Mouse

Human

Rat & Mouse

Mouse & Human

Rat & Human

Rat, Mouse & Human

SVG image

Molecular Function

GO Graph Color Key:

Rat

Mouse

Human

Rat & Mouse

Mouse & Human

Rat & Human

Rat, Mouse & Human

SVG image

Phenotype (1)

Compiled Mammalian Phenotype Ontology Annotations (from IPI)

MP Term	Aspect	Human	Mouse	Rat
behavior/neurological phenotype	MP		Un Un

Disease (0)

There are no Disease Ontology annotations for this protein in the database

Pathway (0)

There are no Pathway Ontology annotations for this protein in the database

KEGG Pathway (1)

KEGG Pathways for this protein (from IPI)

KEGG Pathway	Human	Mouse	Rat
Circadian rhythm (04710)	Present in KEGG pathway	Present in KEGG pathway	Present in KEGG pathway