IPI report for IPI00421773

IpiRecord: IPI00421773

IPI00421773 - RT1-DOb, RT1-DOB PROTEIN (FRAGMENT).
Uniprot Accession: Q6MGA2
Uniprot ID: Q6MGA2_RAT
Mapping: Chr 20, 4743651 - 4759648
Entrez Gene: 365542
Entrez MapView:
RGD: 1595814
+All IPI Database Cross References UniProtKB/TrEMBL: O88189 UniProtKB/TrEMBL: O88189_RAT UniProtKB/TrEMBL: Q31260 UniProtKB/TrEMBL: Q31260_RAT UniProtKB/TrEMBL: Q6MGA2 UniProtKB/TrEMBL: Q6MGA2_RAT ENSEMBL: ENSRNOP00000000526 ENSEMBL: ENSRNOG00000000454 REFSEQ_PROVISIONAL: NP_001008846 REFSEQ_PROVISIONAL: GI:57012350 UniParc: UPI00000E7508 RGD: 1595814 Entrez Gene: 365542 UniGene: Rn.215279 UniGene: Rn.33311 RZPD: Rn.33311 InterPro: IPR007110 InterPro: IPR013783 InterPro: IPR003597 InterPro: IPR011162 InterPro: IPR014745 InterPro: IPR000353 Pfam: PF07654 Pfam: PF00969 ProDom: PD000328 SMART: SM00407 PROSITE: PS50835 SUPERFAMILY: SSF54452 GENE3D: G3DSA:2.60.40.10 GENE3D: G3DSA:3.10.320.10

IPI00421773 - RT1-DOb, RT1-DOB PROTEIN (FRAGMENT).

Uniprot Accession: Q6MGA2

Uniprot ID: Q6MGA2_RAT

Mapping: Chr 20, 4743651 - 4759648

Entrez Gene: 365542

Entrez MapView: Geneprod

RGD: 1595814

+All IPI Database Cross References

IPI records in this ortholog cluster (Cluster: MGI_ORTHOLOGY_14381)
Rat: RT1-DOb, RT1-DOB PROTEIN (FRAGMENT).
Mouse: H2-Ob, MHC A-BETA-2 CHAIN.
Mouse: H2-Ob, FULL INSERT SEQUENCE.
Mouse: H2-Ob, HISTOCOMPATIBILITY 2, O REGION BETA LOCUS.
Rat: RT1-DOb, 32 KDA PROTEIN.
Human: HLA-DOB, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DO BETA CHAIN PRECURSOR.
Human: HLA-DOB, HLA-DOB PROTEIN.

IPI records in this ortholog cluster (Cluster: MGI_ORTHOLOGY_14381)

Rat: RT1-DOb, RT1-DOB PROTEIN (FRAGMENT).

Mouse: H2-Ob, MHC A-BETA-2 CHAIN.

Mouse: H2-Ob, FULL INSERT SEQUENCE.

Mouse: H2-Ob, HISTOCOMPATIBILITY 2, O REGION BETA LOCUS.

Rat: RT1-DOb, 32 KDA PROTEIN.

Human: HLA-DOB, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DO BETA CHAIN PRECURSOR.

Human: HLA-DOB, HLA-DOB PROTEIN.

Annotations for RT1-DOb and orthologs

GO Annotation Table

Compiled GO Annotations (from IPI)

GO Term	Aspect	Human	Mouse	Rat
lysosome	C	IDA	ISS
membrane	C	IEA	RCA	IEA
integral to membrane	C	IEA	RCA	IEA
MHC class II protein complex	C	IEA	IEA	IEA
intracellular	C		IDA
MHC class II receptor activity	F	TAS
immune response	P	IEA	RCA	IEA
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	P	IEA	IEA	IEA

Cellular Component

GO Graph Color Key:

Rat

Mouse

Human

Rat & Mouse

Mouse & Human

Rat & Human

Rat, Mouse & Human

SVG image

Biological Process

GO Graph Color Key:

Rat

Mouse

Human

Rat & Mouse

Mouse & Human

Rat & Human

Rat, Mouse & Human

SVG image

Molecular Function

GO Graph Color Key:

Rat

Mouse

Human

Rat & Mouse

Mouse & Human

Rat & Human

Rat, Mouse & Human

SVG image

Phenotype (0)

There are no Mammalian Phenotype Ontology annotations for this protein in the database

Disease (0)

There are no Disease Ontology annotations for this protein in the database

Pathway (0)

There are no Pathway Ontology annotations for this protein in the database

KEGG Pathway (3)

KEGG Pathways for this protein (from IPI)

KEGG Pathway	Human	Mouse	Rat
Antigen processing and presentation (04612)	Present in KEGG pathway	Present in KEGG pathway	Present in KEGG pathway
Cell adhesion molecules (CAMs) (04514)	Present in KEGG pathway	Present in KEGG pathway	Present in KEGG pathway
Type I diabetes mellitus (04940)	Present in KEGG pathway	Present in KEGG pathway	Present in KEGG pathway